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A comparative account of microRNA resources, feature-validations and application-based categorizations

omiRas

Tool nameomiRas
URLhttp://tools.genxpro.net/omiras/.
Important featuresIt gives static annotation results including length distribution, mapping,statistics, alignments and quantification tables for each library as well as lists of differentially expressed ncRNAs.
CitationsMFCller S, Rycak L, Winter P, Kahl G, Koch I, Rotter B.omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data.Bioinformatics. 2013 Oct 15; 29(20):2651-2. doi: 10.1093/bioinformatics/btt457.PMID: 23946503
Year of publication2013
Rank by usage frequency100
Comments
FunctionFind microRNA, FUNCTIONAL ANALYSIS, FUNCTIONAL ANALYSIS: annotation or classification, SPECIES: human, SPECIES: mouse, http://tools.genxpro.net/omiras/., It gives static annotation results including length distribution- mapping-statistics- alignments and quantification tables for each library as well as lists of differentially expressed ncRNAs., MFCller S- Rycak L- Winter P- Kahl G- Koch I- Rotter B.omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data.Bioinformatics. 2013 Oct 15; 29(20):2651-2. doi: 10.1093/bioinformatics/btt457.PMID: 23946503, 2013, 100, Online, Downloadable, Downloadable, The Web tool allows the user to submit raw sequencing data and results are presented as: (i) static annotation results including length distribution- mapping statistics- alignments and quantification tables for each library as well as lists of differentially expressed ncRNAs between conditions and (ii) an interactive network visualization of user-selected miRNAs and their target genes based on the combination of several miRNA-mRNA interaction databases., Find microRNA
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