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A comparative account of microRNA resources, feature-validations and application-based categorizations

mirTools

Tool namemirTools
URL1. http://centre.bioinformatics.zj.cn/mirtools/ 2. http://59.79.168.90/mirtools
Important featuresComputational tool for determining potential novel microRNAs, profiling and analysis based on high throughput sequencing data.
CitationsZhu E, Zhao F, Xu G, Hou H, Zhou L, Li X, Sun Z, Wu J. mirTools: microRNA profiling and discovery based on high-throughput sequencing. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W392-7. Epub 2010 May 16. PubMed PMID: 20478827; PubMed Central PMCID: PMC2896132.
Year of publication2010
Rank by usage frequency100
CommentsTo be validated
FunctionFIND microRNA: mature form, EXPERIMENTAL data analysis, 1. http://centre.bioinformatics.zj.cn/mirtools/ 2. http://59.79.168.90/mirtools, Computational tool for determining potential novel microRNAs- profiling and analysis based on high throughput sequencing data., Zhu E- Zhao F- Xu G- Hou H- Zhou L- Li X- Sun Z- Wu J. mirTools: microRNA profiling and discovery based on high-throughput sequencing. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W392-7. Epub 2010 May 16. PubMed PMID: 20478827; PubMed Central PMCID: PMC2896132. , 2010, 100, To be validated, Online, I. QUERY OR INPUT DATA: depending on the number of samples to be analyzed click on the relevant page (single or multiple) II. OUTPUT DATA: details on characterization and classification of large scale short reads- annotation information on known microRNAs- differentially expressed microRNAs- novel microRNAs etc.
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