microTranspoGene | Tool name | microTranspoGene |
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| URL | http://transpogene.tau.ac.il/microTranspoGene.html |
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| Important features | Database of microRNAs that are derived from transposable elements. |
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| Citations | Levy A, Sela N, Ast G. TranspoGene and microTranspoGene: transposed elements
influence on the transcriptome of seven vertebrates and invertebrates. Nucleic
Acids Res. 2008 Jan;36(Database issue):D47-52. Epub 2007 Nov 5. PubMed PMID:
17986453; PubMed Central PMCID: PMC2238949. |
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| Year of publication | 2008 |
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| Rank by usage frequency | 100 |
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| Comments | Dataset downloadable |
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| Function | 1.1 FIND microRNA: precursor, FUNCTIONAL ANALYSIS: regulation/ expression, SPECIES: human, SPECIES: mouse, SPECIES: zebrafish, SPECIES: worm, http://transpogene.tau.ac.il/microTranspoGene.html, Database of microRNAs that are derived from transposable elements., Levy A- Sela N- Ast G. TranspoGene and microTranspoGene: transposed elements
influence on the transcriptome of seven vertebrates and invertebrates. Nucleic
Acids Res. 2008 Jan;36(Database issue):D47-52. Epub 2007 Nov 5. PubMed PMID:
17986453; PubMed Central PMCID: PMC2238949., 2008, 100, Dataset downloadable, Online, I. SPECIES SUPPORTED INCLUDE: human- mouse- zebrafish- nematode II. QUERY OR INPUT 1. Choose microRNA pre-cursor and organism OR choose from the given list of microRNA pre-cursors III. OUTPUT DATA: tabular format of results with details on organism- genome build- chromosomal location- strand- pre-cursor microRNA and overlapping transposable elements. |
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