Home   |  About Startbioinfo |   Other web-portals | BdataA  | 

Categories of resources

Suggested Readings
 
 
A comparative account of microRNA resources, feature-validations and application-based categorizations

miRu

Tool namemiRu
URL1. http://plantgrn.noble.org/psRNATarget/ 2. http://bioinfo3.noble.org/miRU.htm
Important featuresComputational tool for prediction of plant microRNA target genes.
CitationsZhang Y. miRU: an automated plant miRNA target prediction server. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W701-4. PubMed PMID: 15980567; PubMed Central PMCID: PMC1160144.
Year of publication2005
Rank by usage frequency100
CommentsRedirected to psRNATarget site
FunctionSPECIES: plant, 1. http://plantgrn.noble.org/psRNATarget/ 2. http://bioinfo3.noble.org/miRU.htm, Computational tool for prediction of plant microRNA target genes. , Zhang Y. miRU: an automated plant miRNA target prediction server. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W701-4. PubMed PMID: 15980567; PubMed Central PMCID: PMC1160144., 2005, 100, Redirected to psRNATarget site, Online, I. SPECIES SUPPORTED INCLUDE: plant II. QUERY OR INPUT DATA: 1. Enter small RNA sequence or upload file in FASTA format (file/ input sequence size limit: 20M)- 2. Choose a preloaded transcript/ genomic library for target search- other default parameters can be selected. III. OUTPUT DATA: details on microRNAs and their predicted targets. Provision for batch downloading- key word searching and results sorting of the output data is made available through access to online tools., Analyze microRNA based on species of interest., 6. SPECIES
Category

copyright © BdataA; all rights reserved