miRex | Tool name | miRex |
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| URL | http://miracle.igib.res.in/mirex/ |
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| Important features | Web based resource which assists users to evaluate and study gene expression and also serves as an online repository for microRNA gene expression data. |
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| Citations | Bargaje R, Hariharan M, Scaria V, Pillai B. Consensus miRNA expression
profiles derived from interplatform normalization of microarray data. RNA. 2010
Jan;16(1):16-25. Epub 2009 Nov 30. PubMed PMID: 19948767; PubMed Central PMCID:
PMC2802026.
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| Year of publication | 2010 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | FUNCTIONAL ANALYSIS: regulation/ expression, SPECIES: mouse, SPECIES: zebrafish, http://miracle.igib.res.in/mirex/, Web based resource which assists users to evaluate and study gene expression and also serves as an online repository for microRNA gene expression data. , Bargaje R- Hariharan M- Scaria V- Pillai B. Consensus miRNA expression
profiles derived from interplatform normalization of microarray data. RNA. 2010
Jan;16(1):16-25. Epub 2009 Nov 30. PubMed PMID: 19948767; PubMed Central PMCID:
PMC2802026.
, 2010, 100, Online, I. SPECIES SUPPORTED INCLUDE: Homo sapiens- Mus musculus- Arabidopsis thaliana- Oryza sativa II. QUERY OR INPUT DATA: 1. Query by datasets- miRNAs 2. Search data: Choose experiment type- organism- microRNA- author- tissue 3. Compare datasets: choose from the given sets of data 4. Simple search: enter microRNA- organism- tissue- keyword 5. ID converter 6. miRNA information III. OUTPUT DATA: details on experiments- comparison results- microRNAs related to specific datasets- etc IV. ADDITIONAL INFORMATION: It is basically constructed from a database of Z scores from miRNA expression studies in zebrafish- Arabidopsis- mouse- and human. (miRex) (miRNA expression). |
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