SomamiR Tool name | SomamiR |
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URL | http://compbio.uthsc.edu/SomamiR/ |
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Important features | The database contains a collection of germline and somatic mutations in miRNAs and their targets that have been experimentally shown to impact miRNA function and have been associated with cancer. |
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Citations | Bhattacharya A, Ziebarth JD, Cui Y.SomamiR-a database for somatic mutations impacting microRNA function in cancer. Nucleic Acids Res. 2013 Jan;41(Database issue):D977-82. doi: 10.1093/nar/gks1138. PMID:23180788 |
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Year of publication | 2013 |
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Rank by usage frequency | 100 |
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Comments | |
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Function | Find microRNA, FIND TARGET: pseudo and real, FIND TARGET: non conserved, FIND TARGET: database, FUNCTIONAL ANALYSIS: regulation/ expression, FUNCTIONAL ANALYSIS: pathways, FUNCTIONAL ANALYSIS: SNP/ genetic variations, FUNCTIONAL ANALYSIS: annotation or classification, SPECIES: human, SPECIES: rat , SPECIES: mouse, http://compbio.uthsc.edu/SomamiR/, The database contains a collection of germline and somatic mutations in miRNAs and their targets that have been experimentally shown to impact miRNA function and have been associated with cancer., Bhattacharya A- Ziebarth JD- Cui Y.SomamiR-a database for somatic mutations impacting microRNA function in cancer. Nucleic Acids Res. 2013 Jan;41(Database issue):D977-82. doi: 10.1093/nar/gks1138. PMID:23180788, 2013, 100, Online, Downloadable, Online/ downloadable, Downloadable, SomamiR database highlight the somatic mutations that alter experimentally supported target sites., Find microRNA, Downloadable |
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