GeneTrail | Tool name | GeneTrail |
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| URL | http://genetrail.bioinf.uni-sb.de/tools.php |
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| Important features | 1. Web based set of tools that assists a user in gene set functional enrichment analysis of highthroughput data. 2. An additional tool processes a given list of microRNAs and predicts their targeted genes in the format of their corresponding gene IDs. |
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| Citations | Backes, C., Keller, A., Kuentzer, J., Kneissl, B., Comtesse, N., Elnakady, Y.A., MFCller, R., Meese, E., and Lenhof, H.P. GeneTrail - advanced gene set enrichment analysis. Nucleic Acid Research, Web Server Issue 2007 |
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| Year of publication | 2007 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | FUNCTIONAL ANALYSIS: regulation/ expression, EXPERIMENTAL data analysis, http://genetrail.bioinf.uni-sb.de/tools.php, 1. Web based set of tools that assists a user in gene set functional enrichment analysis of highthroughput data. 2. An additional tool processes a given list of microRNAs and predicts their targeted genes in the format of their corresponding gene IDs. , Backes- C.- Keller- A.- Kuentzer- J.- Kneissl- B.- Comtesse- N.- Elnakady- Y.A.- MFCller- R.- Meese- E.- and Lenhof- H.P. GeneTrail - advanced gene set enrichment analysis. Nucleic Acid Research- Web Server Issue 2007, 2007, 100, Online, I. SPECIES SUPPORTED INCLUDE: Homo sapiens- Mus musculus- Rattus norvegicus- Caenorhabditis elegans- Drosophila melanogaster- Danio rerio II. QUERY OR INPUT DATA: 1. Choose organism 2. Select miRNA target threshold( p-value of 0.01- or 0.001- or 0.0001)
3. Input miRNA IDs (space or newline separated): III. OUTPUT DATA: predicts their targeted genes in the format of their corresponding gene IDs. Genetrail provides details of enrichment analysis of highthroughput data |
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