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A comparative account of microRNA resources, feature-validations and application-based categorizations

ExprTarget

Tool nameExprTarget
URLhttp://www.scandb.org/apps/microrna/
Important featuresComputational tool for predicting human microRNA targets by integrating methods such as miRanda, PicTar, TargetScan as well as the genome-wide HapMap miRNA and mRNA expression data sets which were generated in the authors laboratory.
CitationsGamazon ER, Im HK, Duan S, Lussier YA, Cox NJ, Dolan ME, Zhang W. Exprtarget: an integrative approach to predicting human microRNA targets. PLoS One. 2010 Oct 21;5(10):e13534. PubMed PMID: 20975837; PubMed Central PMCID: PMC2958831.
Year of publication2010
Rank by usage frequency100
Comments
FunctionFIND TARGET: integrated tools, SPECIES: human, http://www.scandb.org/apps/microrna/, Computational tool for predicting human microRNA targets by integrating methods such as miRanda- PicTar- TargetScan as well as the genome-wide HapMap miRNA and mRNA expression data sets which were generated in the authors laboratory. , Gamazon ER- Im HK- Duan S- Lussier YA- Cox NJ- Dolan ME- Zhang W. Exprtarget: an integrative approach to predicting human microRNA targets. PLoS One. 2010 Oct 21;5(10):e13534. PubMed PMID: 20975837; PubMed Central PMCID: PMC2958831. , 2010, 100, Online, I. SPECIES SUPPORTED INCLUDE: human II. QUERY OR INPUT DATA: 1. Enter target genes or microRNAs 2. Select prediction algorithm III. OUTPUT DATA: Table depicting microRNA target predicitons, Analyze microRNAs related to plant.
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