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Categories of resources
Post-analysis categorization
Literature search
Post-survey categorization
Features validated in most cases
Gene expression
MicroRNA
Pathways
Primer designing
Protein-protein interactions (commonly used resources)
Protein structure prediction
Features not validated
Alternative splice form analysis
DNA motif detection
Microbiology
Multiple sequence alignment
Next generation sequencing
Simple lists
Carbohydrates
Gene ID conversion
Lipids
Promoter prediction
Protein-protein interactions (all resources)
RNA structure prediction
SNP analysis
Preliminary lists
Antibodies
Biomarkers
Cell lines
Clinical trials
DNA/RNA structures
Disease-gene relationships
Enzymes
Functional analysis
Gene Ontology specific analysis
Gene/protein unified information
Genetics
Genomes and Genomics
Mass spectrometry
Microarray data analysis
Molecular docking
Nomenclature
Organelles
Orthologs
Pharmacokinetics and toxicology
Phylogeny/Taxonomy
Protein domains
Protein localization
Protein-nucleic acid interactions
Secretome
Small molecules
Spectral analysis
Text-mining
Transcription factors and binding sites
Suggested Readings
Basic concepts
Broad reviews
Other reviews
Case studies
Comparison of resources
Intuitive browsing
Multi-level categories
Alphabetical list
All resources
Category-wise alphabetical list
Alternative splice form analysis [categorized]
Antibodies [preliminary lists]
Biomarkers [preliminary lists]
Carbohydrates [simple lists]
Carbohydrates_Old [simple lists]
Cell lines [preliminary lists]
Clinical trials [preliminary lists]
DNA motif detection [categorized]
DNA-RNA structure1 [preliminary lists]
DNA-RNA structures [preliminary lists]
Disease-gene relationships [preliminary lists]
Enzymes [preliminary lists]
Functional analysis [preliminary lists]
Gene ID conversion [simple lists]
Gene Ontology specific analysis [preliminary lists]
Gene expression [categorized]
Gene protein unified information [preliminary lists]
GeneExpression_resources [preliminary lists]
Genetics [preliminary lists]
Genomes and Genomics [preliminary lists]
Genomes and Genomics [simple lists]
Lipids [simple lists]
Lipids_Old [simple lists]
Long non-coding RNA [simple lists]
Mass spectrometry [preliminary lists]
MicroRNA [categorized]
MicroRNA_Old [categorized]
Microarray data analysis [preliminary lists]
Microbiology [categorized]
Molecular docking [preliminary lists]
Multiple sequence alignment [categorized]
Next generation sequencing [categorized]
Nomenclature [preliminary lists]
Organelles [preliminary lists]
Organelles [simple lists]
Organelles_bck [preliminary lists]
Orthologs [preliminary lists]
PPI_AR [simple lists]
PPI_CUS [categorized]
PS_Test [categorized]
Pathways [categorized]
Pathways_Old [categorized]
Pharmacokinetics and Pharmacodynamics [preliminary lists]
Phylogeny [preliminary lists]
Primer designing [categorized]
Promoter prediction [simple lists]
Protein domains [preliminary lists]
Protein localization [preliminary lists]
Protein structure prediction [categorized]
Protein-nucleic acid interactions [preliminary lists]
Protein_protein_interactions_All_Resources [simple lists]
RNA structure prediction [simple lists]
SNP analysis [simple lists]
SNP analysis [categorized]
SNP_Test [categorized]
SNP_analysis [simple lists]
S_Test [simple lists]
Secretome [preliminary lists]
Small molecules [preliminary lists]
Spectral analysis [preliminary lists]
TFBS_backup [preliminary lists]
Test [preliminary lists]
Text-mining [preliminary lists]
Toxicology [preliminary lists]
Transcription factors and binding sites [preliminary lists]
phylo [preliminary lists]
piRNA [simple lists]
Gene expression
Total Resource - 40
4DXpress
- Expression Database in 4D
ArrayExpress
Bgee
- a dataBase for Gene Expression Evolution
BioGPS
BloodExpress
- A database of gene expression in mouse haematopoiesis
BlotBase
caArray
- Array Data Management System
CCDB
- Cervical cancer gene DataBase
CIBEX
CleanEx
COXPRESdb
EDB
- Endometrial Data Base
EDR
- Endometrium Database Resource
EURExpress
- A Transcriptome Atlas Database for Mouse Embryo
FlyBase
- A Database of Drosophila Genes
GEMMA
GENATLAS
GeneCards
GeneSigDB
- Curated Gene Signatures
GEO
- Gene Expression Omnibus
GEOSS/GeneX Va
- Gene Expression Open Source System
GermOnline
GermSAGE
GUDMAP
- GenitoUrinary Molecular Anatomy Project
HPRD
- Human Protein Reference Database
HuGEIndex
- Human Gene Expression Index
MGEx-Tdb
- Mammalian Gene Expression Testis database
MGEx-Udb
- Mammalian Gene Expression Uterus database
ONCOMINE
PEPR
- Public Expression Profiling Resource
RefExA
- Reference database for gene Expression Analysis
SMD
- Stanford Microarray Database
T1DBase
T2D-Db
- An Integrated Data Resource on Type-2 Diabetes
TB database
- An integrated platform for Tuberculosis research
TiGER
- Tissue-specific Gene Expression and Regulation
TiProD
- Tissue specific Promoter Database
TissueDistributionDBs
UniGene
UniProtKB/Swiss-Prot
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copyright © Dr. Kshitish Acharya K; all rights reserved
